[Smtk-developers] SMTK Build issues against ParaView Release

Thu Jul 14 19:14:12 EDT 2016

Hi All,

When I try to build SMTK I get:

[12/29] Linking CXX shared library lib/libsmtkPolygonQtExt.dylib
FAILED: : && /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++  -fPIC  --sysroot=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk -std=c++11  -O3 -DNDEBUG -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.11.sdk -dynamiclib -Wl,-headerpad_max_install_names  -o lib/libsmtkPolygonQtExt.dylib -install_name @rpath/libsmtkPolygonQtExt.dylib smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/pqArcWidgetManager.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/pqArcWidgetPanel.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/pqPolygonArc.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/vtkPolygonArcInfo.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/moc_pqArcWidgetManager.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/moc_pqArcWidgetPanel.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/moc_pqPolygonArc.cxx.o smtk/bridge/polygon/qt/CMakeFiles/smtkPolygonQtExt.dir/qrc_qtWidgetsIcons.cxx.o -F/usr/local/qt-kitware/4.8.6/lib lib/libsmtkPQWidgetsExt.dylib lib/libvtkPolygonOperatorsExt-7.1.1.dylib lib/libvtkSMTKSourceExt-7.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkpqApplicationComponents-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkpqComponents-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkpqPython-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkpqCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkpqWidgets-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libQtTesting.dylib -framework QtHelp /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVServerManagerRendering-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVServerImplementationRendering-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVClientServerCoreRendering-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkDomainsChemistry-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVVTKExtensionsDefault-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersParallelStatistics-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOEnSight-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOImport-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOParallel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIONetCDF-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOParallelExodus-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOExodus-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOParallelXML-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVVTKExtensionsRendering-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkGUISupportQt-pv5.1.1.dylib -framework QtGui -framework QtNetwork -framework QtCore /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersGeneric-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersHyperTree-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOExportOpenGL2-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOExport-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingParallel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingVolumeAMR-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersAMR-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkViewsContext2D-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVServerManagerCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVServerImplementationCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVClientServerCoreCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersParallel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersProgrammable-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVVTKExtensionsCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkParallelCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPVCommon-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkClientServer-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libprotobuf.dylib /usr/local/qt-kitware/4.8.6/lib/QtGui.framework/QtGui /usr/local/qt-kitware/4.8.6/lib/QtCore.framework/QtCore lib/libvtkSMTKOperatorsExt-7.1.1.dylib lib/libsmtkCore.dylib lib/libcJSON.a thirdparty/moab/lib/libMOAB.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libhdf5.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libsz.dylib /usr/lib/libdl.dylib /usr/lib/libm.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libnetcdf.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libnetcdf_c++.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libhdf5.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libsz.dylib /usr/lib/libdl.dylib /usr/lib/libm.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libnetcdf.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/install/lib/libnetcdf_c++.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOLegacy-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOXML-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOXMLParser-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkViewsInfovis-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkViewsCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkInteractionWidgets-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkInteractionStyle-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersHybrid-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingAnnotation-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingColor-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkChartsCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersImaging-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingGeneral-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingSources-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkInfovisLayout-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersModeling-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingHybrid-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkInfovisCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingLabel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersExtraction-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersStatistics-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingFourier-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkalglib-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingMatplotlib-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkPythonInterpreter-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkWrappingPython27Core-pv5.1.1.dylib /usr/lib/libpython2.7.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingContextOpenGL2-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingContext2D-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingVolumeOpenGL2-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingVolume-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOImage-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingGL2PSOpenGL2-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingFreeType-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkfreetype-pv5.1.1.dylib /usr/lib/libz.dylib -framework ApplicationServices -framework CoreServices /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingOpenGL2-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkRenderingCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersGeometry-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonColor-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersSources-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersGeneral-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkFiltersCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonComputationalGeometry-pv5.1.1.dylib -framework Cocoa /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkglew-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkImagingCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOGeometry-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkIOCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonExecutionModel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonDataModel-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonSystem-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonTransforms-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonMisc-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonMath-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtkCommonCore-pv5.1.1.dylib /Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/paraview/src/paraview-build/lib/libvtksys-pv5.1.1.dylib -Wl,-rpath,/Users/obara/Projects/Kitware/Builds/CMBSuperBuild-ParaVewRelBranch/superbuild/smtk/src/smtk-build/lib && :
Undefined symbols for architecture x86_64:
  "vtkDomainsChemistryOpenGL2_AutoInit_Destruct()", referenced from:
      vtkDomainsChemistry_AutoInit::~vtkDomainsChemistry_AutoInit() in pqArcWidgetManager.cxx.o
      vtkDomainsChemistry_AutoInit::~vtkDomainsChemistry_AutoInit() in pqArcWidgetPanel.cxx.o
      vtkDomainsChemistry_AutoInit::~vtkDomainsChemistry_AutoInit() in pqPolygonArc.cxx.o
  "vtkDomainsChemistryOpenGL2_AutoInit_Construct()", referenced from:
      __GLOBAL__sub_I_pqArcWidgetManager.cxx in pqArcWidgetManager.cxx.o
      __GLOBAL__sub_I_pqArcWidgetPanel.cxx in pqArcWidgetPanel.cxx.o
      __GLOBAL__sub_I_pqPolygonArc.cxx in pqPolygonArc.cxx.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
[12/29] Building CXX object smtk/bridge/polyg...hon/smtk_bridge_polygon_session_wrapper.cpp.o
ninja: build stopped: subcommand failed.

Any idea as to why we are linking with Chemistry?

Bob

Robert M. O'Bara, MEng.
Assistant Director of Scientific Computing

Kitware Inc.
28 Corporate Drive
Suite 101
Clifton Park, NY 12065

Phone: (518) 881- 4931

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